BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E08LP1|AL426539
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1355 1606 0.0
>3x_Contig1355
Length = 8652
Score = 1606 bits (808), Expect = 0.0
Identities = 811/814 (99%)
Strand = Plus / Minus
Query: 1 gatccctgaagcgaaattggctcgtgwatgtgaaattctataccagatggtttgtatgtc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5224 gatccctgaagcgaaattggctcgtgaatgtgaaattctataccagatggtttgtatgtc 5165
Query: 61 taccgattatgatgcatggagagacgaagaagaaccagtgtctgtacaaactgttatccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5164 taccgattatgatgcatggagagacgaagaagaaccagtgtctgtacaaactgttatccg 5105
Query: 121 taatttacagaacaatgccaaamatgctaaccatttggcatcccgggtcattttagaaat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5104 taatttacagaacaatgccaaaaatgctaaccatttggcatcccgggtcattttagaaat 5045
Query: 181 ggcaaagcaacttcctgaatttatgaacaacggtgatggtctaaaggatgccatgaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 ggcaaagcaacttcctgaatttatgaacaacggtgatggtctaaaggatgccatgaagta 4985
Query: 241 ctccatttcaacaaaacctgaagccatgtctcaagatgccttggccaagctaaagtttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 ctccatttcaacaaaacctgaagccatgtctcaagatgccttggccaagctaaagtttct 4925
Query: 301 attcccaaaccattggtaacgctgtaaatttctcttctataaactttataaactatacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 attcccaaaccattggtaacgctgtaaatttctcttctataaactttataaactatacgc 4865
Query: 361 ggtaggtagccatgtaagtmataacattcttatcataactgctatcagaggttcgaaacc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 ggtaggtagccatgtaagtaataacattcttatcataactgctatcagaggttcgaaacc 4805
Query: 421 aaaagaagaagaaaaagaatcgttctccgaagtacgcatgcttttcagcgcttcttcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4804 aaaagaagaagaaaaagaatcgttctccgaagtacgcatgcttttcagcgcttcttcatc 4745
Query: 481 gcacttggtgagtccatcatataagtataccggttgcttggaatatatccgggacgagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 gcacttggtgagtccatcatataagtataccggttgcttggaatatatccgggacgagtg 4685
Query: 541 tctggctgtgagcgtgtcgatgtgaataaagttgtaggagtattggagacatttgttatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 tctggctgtgagcgtgtcgatgtgaataaagttgtaggagtattggagacatttgttatg 4625
Query: 601 tgatcgacaccaaaggcgtttactttcttcggttgtaaagagaaagatacatgatttttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4624 tgatcgacaccaaaggcgtttactttcttcggttgtaaagagaaagatacatgatttttt 4565
Query: 661 ttcacttctgcttgctgaagggtattcaactcacgcattttcattggagtctgtaaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 ttcacttctgcttgctgaagggtattcaactcacgcattttcattggagtctgtaaagat 4505
Query: 721 ttgaatatgaaaggcttgtggctggattttgattctgcttcatttaaggatttcacttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 ttgaatatgaaaggcttgtggctggattttgattctgcttcatttaaggatttcacttta 4445
Query: 781 gagttacctatattaattgaaggatcaaaggatc 814
||||||||||||||||||||||||||||||||||
Sbjct: 4444 gagttacctatattaattgaaggatcaaaggatc 4411
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6997
Number of Sequences: 1807
Number of extensions: 6997
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)